Stanford Genomics provides assays, services, and access to scientific instrumentation for genomic research. The facility is the product of combining the Genetics Sequencing Service Center (GSSC) and the Stanford Functional Genomics Facility (SFGF).
Stanford Genomics is currently accessible and available to assist the Stanford research community with ongoing research projects as well as COVID-19 related research projects. Please indicate in your iLab request if your project is COVID-19 related so that we can prioritize your critical and essential research. Please contact Luisa Jimenez (luisaj@stanford.edu) or John Coller (jcoller@stanford.edu) if assistance is needed.
Available Equipment 24/7: (You can request 24/7 access to the following equipment by going to the Request Services tab and selecting SFGF 24/7 Access)
John Coller, PhD | Stanford Genomics Service Center Director
Office: CCSR 0120 - (650) 736-1026
Lab: CCSR 0120 - (650) 736-2434
Email: john.coller at stanford.edu
Name | Role | Phone | Location | |
Luisa Jimenez |
Administration | 736-1763 | luisaj@stanford.edu | CCSR 4256 |
Alain Boussard |
Programmer | 736-1763 | alainb@stanford.edu | CCSR 4256 |
Xuhuai Ji |
High Throughput Sequencing (MiSeq) NGS Library Preparation NGS Sample QC |
736-2434 | xuhuai.ji@stanford.edu | CCSR 0120 |
Vanita Natu |
Genome Wide Genotyping NGS Library Preparation Sample Tracking and Cell Line Authenication NGS Sample QC |
736-2434 | vanita@stanford.edu | CCSR 0120 |
Vida Shokoohi |
Genome Wide Gene Expression PCR Gene Expression and Genotyping NGS Library Preparation DNA and RNA Sample Extraction and QC |
736-2434 | faraz@stanford.edu | CCSR 0120 |
Dhananjay Wagh |
High Throughput Sequencing (NextSeq) Digitial PCR Biomolecule Binding Assays NGS Sample QC 10X Genomics |
736-2434 | dwagh@stanford.edu | CCSR 0120 |
Location |
Hours |
Lab: Stanford Genomics Service Center
Mailing Address: Stanford Genomics Service Center
Shipping Address: Stanford Genomics Service Center
Contact Info: Office: (650)736-1763 Email: microarray@stanford.edu |
8 a.m. - 6 p.m., Monday to Friday 24/7 access for trained users
|
As with all Stanford Service Centers, credit must be given to the Stanford Genomics Service Center for data that results in a publication. If the work done at SGSC produces data resulting in a figure in a publication, you are required to acknowledge the Stanford Genomics Service Center in the publication. Further, if SGSC staff members provided significant experimental design, data interpretation, or other intellectual contribution (as evaluated by the PI), then it is expected that these individuals will be coauthors on the publication.
The Illumina HiSeq 4000 was purchased using a NIH S10 Shared Instrumentation Grant (S10OD018220). The Illumina NovaSeq 6000 was also purchased using a NIH S10 Shared Instrumentation Grant (1S10OD02521201). Please acknowledge the grant in any publications using data from these instruments.
Name | Role | Phone | Location | |
---|---|---|---|---|
John Coller, Ph.D. |
Director
|
650.736.1026
|
john.coller at stanford.edu
|
CCSR 0120
|
Debra Panasuk |
Finance Manager
|
650.725.7483
|
dpanasuk@stanford.edu
|
Biomedical Innovations Building, 240 Pasteur Dr., Palo Alto, CA 94304-5422
|
Price List |
► Custom Labor (8) | |||
Name | Description | Price | |
---|---|---|---|
Reagents - Order Processing Fee (per order) | Inquire | ||
Agilent Bioanalyzer - Service Work Time (per hour) | Inquire | ||
Custom Printing - Service Work Time (per hour) | Inquire | ||
Microarray - Service Work Time (per hour) | Inquire | ||
NGS(HiSeq) - Service Work Time (per hour) | Inquire | ||
NGS(MiSeq) - Service Work Time (per hour) | Inquire | ||
NGS(NextSeq) - Service Work Time (per hour) | Inquire | ||
Gene Construct - Service Work Time (per hour) | Inquire | ||
► Consulting (2) | |||
Name | Description | Price | |
Consulting - Director (per hour) | Inquire | ||
Consulting - Technician 1 (per hour) | Inquire | ||
► Custom Materials (8) | |||
Name | Description | Price | |
Agilent Bioanalyzer - Service Work Materials | Inquire | ||
Custom Printing - Service Work Materials | Inquire | ||
Doping Controls Commercial Batch - Service Work Materials | Inquire | ||
Microarray - Service Work Materials | Inquire | ||
NGS(HiSeq) - Service Work Materials | Inquire | ||
NGS(MiSeq) - Service Work Materials | Inquire | ||
NGS(NextSeq) - Service Work Materials | Inquire | ||
Gene Construct - Service Work Materials | Inquire | ||
► No Charge (1) | |||
Name | Description | Price | |
SFGF 24/7 Access (No Charge) |
Request 24/7 access to the equipment in SFGF. |
Inquire |